SE4BIA - Search Engine for BioImage Analysis

Searchable index of image analysis tools.

Script Submission

Quantification of protein expression in dark patches

Quantification of Cy5 protein expression in dark patches.


NeuronRead is an interactive semi-automated image processing workflow developed to extract relevant information (e.g. total neuritic length, average cell body area) from both Phase Contrast and Fluorescence neuronal images.


FRETRatiometric is composed by three macros: FRET_ratiometrics_v0x.x, the main macro for FRET analysis; NormalizeHistogramForPrinting, for normalizing the resulting images for printing proposes and Create_HSB_Image, to create an HSB image with the FRET output. It allows calculating FRET ratiometric between donor and Acceptor channels along time or on a specific time-point.