NeuronRead

NeuronRead is an interactive semi-automated image processing workflow developed to extract relevant information (e.g. total neuritic length, average cell body area) from both Phase Contrast and Fluorescence neuronal images.

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Detailed explanation

A complete tutorial can be found on https://doi.org/10.1016/j.mcn.2017.08.002 and on ua.pt/ibimed/PageText.aspx?id=23714

Authors

Roberto Dias - VIB & KU Leuven Center for Brain & Disease Research
Sandra Vieira - iBiMED, Universidade de Aveiro

keywords

ImageJ; Neuronal Images; Phase Contrast; Morphological analysis

Requirements

Requires ImageJ, with MorphoLibJ v1.2.0, Skeletonize3D and AnalyzeSkeleton installed.