Name:
SaveLasXFileToHyperstack

Version:
v0.2

Type:
Script/Macro

Keywords:
lasX,hyperstack,imageJ

Requirements:
Imagej/Fiji 1.53

Brief Description:
Input LasX isolated tiff files, search for region/positions, stages and  create hyperstack for each one, (xyzct). Save as tiff.

Detailed Explanation:
Input LasX isolated tiff files, search for region/positions, stages and create hyperstack for each one, (xyzct). Save as tiff.

Run as a macro file.
An user input interface is prompted to define input and output folder locations and all the parameters:
Type of acquisition (Tilescan, multiposition)
Number of regions
Number of stages 
Number of timepoints
Time frame
Number of slices 
Number of channels 

Files are organized in hyperstacks and saved as tiffs

DataSet Description:
NA

External Location:
https://github.com/mafsousa/ALM_BIA-scripting-tools/blob/main/SaveLasXFileToHyperstackv0.2.ijm

Link To Publication:


Authors:
Mafalda Sousa - Advanced Light Microscopy,i3S - Instituto de Investigação e Inovação em Saúde